chore: run dify-agent typecheck in python-style (#41701)

Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com>

.github/workflows/style.yml

@@ -45,13 +45,24 @@ jobs:
             .github/workflows/style.yml
             .github/workflows/main-ci.yml
 
+      - name: Check changed files (dify-agent)
+        id: changed-files-dify-agent
+        uses: tj-actions/changed-files@9426d40962ed5378910ee2e21d5f8c6fcbf2dd96 # v47.0.6
+        with:
+          files: |
+            dify-agent/**
+            .github/workflows/style.yml
+            .github/workflows/main-ci.yml
+
       - name: Setup UV and Python
-        if: steps.changed-files.outputs.any_changed == 'true'
+        if: steps.changed-files.outputs.any_changed == 'true' || steps.changed-files-dify-agent.outputs.any_changed == 'true'
         uses: astral-sh/setup-uv@20cfd1bf945f4377ade1205e4dbc17946fc9a30d # v10.0.1
         with:
           enable-cache: false
           python-version: '3.12'
-          cache-dependency-glob: api/uv.lock
+          cache-dependency-glob: |
+            api/uv.lock
+            dify-agent/uv.lock
 
       - name: Install dependencies
         if: steps.changed-files.outputs.any_changed == 'true'
@@ -79,6 +90,14 @@ jobs:
           PYREFLY_OUTPUT_FORMAT: github
         run: make type-check-core
 
+      - name: Run Dify Agent Ruff
+        if: steps.changed-files-dify-agent.outputs.any_changed == 'true'
+        run: make -C dify-agent check
+
+      - name: Run Dify Agent Type Checks
+        if: steps.changed-files-dify-agent.outputs.any_changed == 'true'
+        run: make -C dify-agent typecheck
+
       - name: Dotenv check
         if: steps.changed-files.outputs.any_changed == 'true'
         run: uv run --project api dotenv-linter ./api/.env.example ./web/.env.example

api/uv.lock

@@ -1330,8 +1330,8 @@ provides-extras = ["server"]
 
 [package.metadata.requires-dev]
 dev = [
-    { name = "basedpyright", specifier = ">=1.39.3" },
     { name = "coverage", extras = ["toml"], specifier = ">=7.10.7" },
+    { name = "pyrefly", specifier = ">=1.2.0" },
     { name = "pytest", specifier = ">=9.0.3" },
     { name = "pytest-examples", specifier = ">=0.0.18" },
     { name = "pytest-mock", specifier = ">=3.14.0" },

dify-agent/Makefile

@@ -10,7 +10,7 @@ help:
 	@echo "  make dev            - Run the Dify Agent server with reload"
 	@echo "  make check           - Run Ruff for dify-agent"
 	@echo "  make fix             - Format and fix Ruff issues"
-	@echo "  make typecheck       - Run basedpyright for src, examples, and tests"
+	@echo "  make typecheck       - Run pyrefly for src and examples"
 	@echo "  make test            - Run local tests and docs/example tests"
 	@echo "  make update-examples - Rewrite docs example outputs when needed"
 	@echo "  make docs            - Build MkDocs documentation"
@@ -30,7 +30,7 @@ fix:
 	@uv --directory "$(PROJECT_DIR)" run --project . python -m ruff check --fix .
 
 typecheck:
-	@uv --directory "$(PROJECT_DIR)" run --project . basedpyright --level error src examples tests
+	@uv --directory "$(PROJECT_DIR)" run --project . --group dev --extra server pyrefly check
 
 test:
 	@uv --directory "$(PROJECT_DIR)" run --project . --extra server python -m pytest tests

dify-agent/pyproject.toml

@@ -38,12 +38,12 @@ include = ["agenton*", "agenton_collections*", "dify_agent*", "shellctl*"]
 [tool.setuptools.package-data]
 "dify_agent.layers" = ["_agent_cli_help.json"]
 
-[tool.pyright]
-include = ["src", "examples", "tests"]
-venvPath = "."
-venv = ".venv"
-pythonVersion = "3.12"
-extraPaths = ["src", "examples/agenton", "examples/dify_agent"]
+[tool.pyrefly]
+project-includes = ["src", "examples"]
+project-excludes = [".venv", "tests/"]
+search-path = ["src", "examples/agenton", "examples/dify_agent"]
+python-platform = "linux"
+python-version = "3.12.0"
 
 [tool.pytest.ini_options]
 # Several test modules share a basename across directories (test_layer.py,
@@ -61,8 +61,8 @@ include = ["src/**/*.py", "examples/**/*.py", "tests/**/*.py", "docs/**/*.py"]
 
 [dependency-groups]
 dev = [
-    "basedpyright>=1.39.3",
     "coverage[toml]>=7.10.7",
+    "pyrefly>=1.2.0",
     "pytest>=9.0.3",
     "pytest-examples>=0.0.18",
     "pytest-mock>=3.14.0",

dify-agent/src/agenton/compositor/core.py

@@ -18,7 +18,7 @@ from collections import OrderedDict
 from collections.abc import AsyncGenerator, Mapping, Sequence
 from contextlib import asynccontextmanager
 from dataclasses import dataclass
-from typing import Any, Generic, cast
+from typing import Any, Generic, Self, cast
 
 from pydantic import JsonValue
 
@@ -131,7 +131,7 @@ class Compositor(Generic[PromptT, ToolT, LayerPromptT, LayerToolT, UserPromptT,
         prompt_transformer: CompositorTransformer[LayerPromptT, PromptT] | None = None,
         user_prompt_transformer: CompositorTransformer[LayerUserPromptT, UserPromptT] | None = None,
         tool_transformer: CompositorTransformer[LayerToolT, ToolT] | None = None,
-    ) -> "Compositor[PromptT, ToolT, LayerPromptT, LayerToolT, UserPromptT, LayerUserPromptT]":
+    ) -> Self:
         """Create a reusable compositor plan from serializable graph config.
 
         ``providers`` resolve graph node ``type`` ids. ``node_providers`` are

dify-agent/src/agenton/layers/base.py

@@ -226,7 +226,7 @@ class Layer(
             if deps_type is None and is_generic_template:
                 return
             if deps_type is not None:
-                cls.deps_type = deps_type  # pyright: ignore[reportAttributeAccessIssue]
+                cls.deps_type = cast(type[_DepsT], deps_type)
         if deps_type is None:
             raise TypeError(f"{cls.__name__} must define deps_type or inherit from Layer[DepsT].")
         if not isinstance(deps_type, type) or not issubclass(deps_type, LayerDeps):

dify-agent/src/dify_agent/agent_stub/protocol/agent_stub.py

@@ -18,7 +18,7 @@ from urllib.parse import urlsplit, urlunsplit
 
 from pydantic import AliasChoices, BaseModel, ConfigDict, Field, JsonValue, model_validator
 
-AGENT_STUB_PROTOCOL_VERSION: Final[int] = 1
+AGENT_STUB_PROTOCOL_VERSION: Final[Literal[1]] = 1
 AGENT_STUB_API_BASE_URL_ENV_VAR: Final[str] = "DIFY_AGENT_STUB_API_BASE_URL"
 AGENT_STUB_AUTH_JWE_ENV_VAR: Final[str] = "DIFY_AGENT_STUB_AUTH_JWE"
 

dify-agent/src/dify_agent/layers/ask_human/configs.py

@@ -40,6 +40,10 @@ _HARD_MAX_ACTION_LABEL_CHARS = 120
 _FILE_FIELD_TYPES: Final[frozenset[AskHumanFieldType]] = frozenset({"file", "file-list"})
 
 
+def _default_allowed_field_types() -> list[AskHumanFieldType]:
+    return ["paragraph", "select"]
+
+
 class DifyAskHumanLayerConfig(LayerConfig):
     """Public config for the optional ask-human deferred tool layer.
 
@@ -58,7 +62,7 @@ class DifyAskHumanLayerConfig(LayerConfig):
     tool_description: str | None = None
     max_fields: int = Field(default=8, ge=0)
     max_actions: int = Field(default=4, ge=1)
-    allowed_field_types: list[AskHumanFieldType] = Field(default_factory=lambda: ["paragraph", "select"])
+    allowed_field_types: list[AskHumanFieldType] = Field(default_factory=_default_allowed_field_types)
     allow_file_fields: bool = False
     max_markdown_chars: int = Field(default=8_000, ge=0)
     max_question_chars: int = Field(default=1_000, ge=1)

dify-agent/src/dify_agent/layers/ask_human/layer.py

@@ -20,7 +20,7 @@ from typing import Any, ClassVar, cast
 from pydantic import JsonValue, ValidationError
 from pydantic_ai import Tool
 from pydantic_ai.exceptions import ModelRetry
-from pydantic_ai.tools import DeferredToolRequests, RunContext, ToolDefinition
+from pydantic_ai.tools import ArgsValidatorFunc, DeferredToolRequests, RunContext, ToolDefinition
 from typing_extensions import Self, override
 
 from agenton.layers import EmptyRuntimeState, NoLayerDeps, PydanticAILayer, PydanticAIPrompt, PydanticAITool
@@ -70,7 +70,7 @@ class DifyAskHumanLayer(PydanticAILayer[NoLayerDeps, object, DifyAskHumanLayerCo
                 name=self.config.tool_name,
                 description=self.config.effective_tool_description,
                 prepare=self._prepare_tool_definition,
-                args_validator=self._validate_tool_args,
+                args_validator=cast(ArgsValidatorFunc[object, ...], self._validate_tool_args),
                 sequential=True,
             )
         ]

dify-agent/src/dify_agent/layers/dify_core_tools/configs.py

@@ -21,6 +21,10 @@ type DifyCoreToolProviderType = Literal["plugin", "builtin", "api", "workflow",
 DIFY_CORE_TOOLS_LAYER_TYPE_ID: Final[str] = "dify.core.tools"
 
 
+def _default_parameters_json_schema() -> dict[str, JsonValue]:
+    return {"type": "object", "properties": {}, "required": []}
+
+
 class DifyCoreToolConfig(LayerConfig):
     """Prepared API-routed tool declaration exposed to the model."""
 
@@ -32,9 +36,7 @@ class DifyCoreToolConfig(LayerConfig):
     description: str | None = None
     runtime_parameters: dict[str, JsonValue] = Field(default_factory=dict)
     parameters: list[DifyPluginToolParameter] = Field(default_factory=list)
-    parameters_json_schema: dict[str, JsonValue] = Field(
-        default_factory=lambda: {"type": "object", "properties": {}, "required": []}
-    )
+    parameters_json_schema: dict[str, JsonValue] = Field(default_factory=_default_parameters_json_schema)
 
     model_config: ClassVar[ConfigDict] = ConfigDict(extra="forbid", arbitrary_types_allowed=True)
 

dify-agent/src/dify_agent/layers/dify_plugin/configs.py

@@ -30,6 +30,10 @@ DIFY_PLUGIN_LLM_LAYER_TYPE_ID: Final[str] = "dify.plugin.llm"
 DIFY_PLUGIN_TOOLS_LAYER_TYPE_ID: Final[str] = "dify.plugin.tools"
 
 
+def _default_parameters_json_schema() -> dict[str, JsonValue]:
+    return {"type": "object", "properties": {}, "required": []}
+
+
 class DifyPluginToolOption(BaseModel):
     """Selectable tool option value exposed to the model.
 
@@ -151,9 +155,7 @@ class DifyPluginToolConfig(LayerConfig):
     credentials: dict[str, DifyPluginCredentialValue] = Field(default_factory=dict)
     runtime_parameters: dict[str, DifyPluginToolValue] = Field(default_factory=dict)
     parameters: list[DifyPluginToolParameter] = Field(default_factory=list)
-    parameters_json_schema: dict[str, JsonValue] = Field(
-        default_factory=lambda: {"type": "object", "properties": {}, "required": []}
-    )
+    parameters_json_schema: dict[str, JsonValue] = Field(default_factory=_default_parameters_json_schema)
 
     model_config: ClassVar[ConfigDict] = ConfigDict(extra="forbid", arbitrary_types_allowed=True)
 

dify-agent/src/dify_agent/runtime/compositor_factory.py

@@ -29,7 +29,7 @@ snapshots.
 from __future__ import annotations
 
 from collections.abc import Mapping, Sequence
-from typing import Any, cast
+from typing import Any
 
 from pydantic_ai.messages import UserContent
 
@@ -164,21 +164,18 @@ def build_pydantic_ai_compositor(
     selected provider set explicitly so provider defaulting stays at outer runtime
     boundaries rather than being duplicated here.
     """
-    return cast(
-        Compositor[
-            PydanticAIPrompt[object],
-            PydanticAITool[object],
-            AllPromptTypes,
-            AllToolTypes,
-            UserContent,
-            AllUserPromptTypes,
-        ],
-        Compositor.from_config(
-            config,
-            providers=providers,
-            node_providers=node_providers,
-            **PYDANTIC_AI_TRANSFORMERS,  # pyright: ignore[reportArgumentType]
-        ),
+    return Compositor[
+        PydanticAIPrompt[object],
+        PydanticAITool[object],
+        AllPromptTypes,
+        AllToolTypes,
+        UserContent,
+        AllUserPromptTypes,
+    ].from_config(
+        config,
+        providers=providers,
+        node_providers=node_providers,
+        **PYDANTIC_AI_TRANSFORMERS,
     )
 
 

dify-agent/src/dify_agent/server/app.py

@@ -16,6 +16,7 @@ environment configuration provides a token.
 
 from collections.abc import AsyncGenerator
 from contextlib import asynccontextmanager
+from typing_extensions import cast
 
 import httpx
 from fastapi import APIRouter, FastAPI
@@ -132,10 +133,10 @@ def create_app(settings: ServerSettings | None = None) -> FastAPI:
     configure_server_observability(app)
 
     def get_store() -> RedisRunStore:
-        return state["store"]  # pyright: ignore[reportReturnType]
+        return cast(RedisRunStore, state["store"])
 
     def get_scheduler() -> RunScheduler:
-        return state["scheduler"]  # pyright: ignore[reportReturnType]
+        return cast(RunScheduler, state["scheduler"])
 
     control_plane_router = APIRouter(
         dependencies=[create_bearer_token_dependency(resolved_settings.api_token)],

dify-agent/tests/local/test_packaging.py

@@ -29,8 +29,8 @@ SERVER_RUNTIME_DEPENDENCIES = {
 }
 
 DEV_DEPENDENCIES = {
-    "basedpyright>=1.39.3",
     "coverage[toml]>=7.10.7",
+    "pyrefly>=1.2.0",
     "pytest>=9.0.3",
     "pytest-examples>=0.0.18",
     "pytest-mock>=3.14.0",

dify-agent/uv.lock

@@ -109,18 +109,6 @@ wheels = [
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 ]
 
-[[package]]
-name = "basedpyright"
-version = "1.39.3"
-source = { registry = "https://pypi.org/simple" }
-dependencies = [
-    { name = "nodejs-wheel-binaries" },
-]
-sdist = { url = "https://files.pythonhosted.org/packages/04/19/5a5b9b9197973da732638957be3a65cf514d2f5a4964eeedbf33b6c65bbd/basedpyright-1.39.3.tar.gz", hash = "sha256:2f794e6b5f4260fb89f614ca6cd23c6f305373bb6b50c4ed7794ff2ae647fb14", size = 25503187, upload-time = "2026-04-20T22:14:47.424Z" }
-wheels = [
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-]
-
 [[package]]
 name = "beautifulsoup4"
 version = "4.14.3"
@@ -627,8 +615,8 @@ server = [
 
 [package.dev-dependencies]
 dev = [
-    { name = "basedpyright" },
     { name = "coverage" },
+    { name = "pyrefly" },
     { name = "pytest" },
     { name = "pytest-examples" },
     { name = "pytest-mock" },
@@ -664,8 +652,8 @@ provides-extras = ["server"]
 
 [package.metadata.requires-dev]
 dev = [
-    { name = "basedpyright", specifier = ">=1.39.3" },
     { name = "coverage", extras = ["toml"], specifier = ">=7.10.7" },
+    { name = "pyrefly", specifier = ">=1.2.0" },
     { name = "pytest", specifier = ">=9.0.3" },
     { name = "pytest-examples", specifier = ">=0.0.18" },
     { name = "pytest-mock", specifier = ">=3.14.0" },
@@ -707,7 +695,7 @@ wheels = [
 
 [[package]]
 name = "e2b"
-version = "2.38.0"
+version = "2.46.4"
 source = { registry = "https://pypi.org/simple" }
 dependencies = [
     { name = "attrs" },
@@ -723,9 +711,9 @@ dependencies = [
     { name = "typing-extensions" },
     { name = "wcmatch" },
 ]
-sdist = { url = "https://files.pythonhosted.org/packages/e2/e2/1acb7bd6e16811a3affc89521304420410f97040a0a386497b101f898de3/e2b-2.38.0.tar.gz", hash = "sha256:b245976cc946d144baf77341b19fa537bfd7cbd9028dc8ef59bd6947f5e329c1", size = 205432, upload-time = "2026-08-10T17:57:07.643Z" }
+sdist = { url = "https://files.pythonhosted.org/packages/7d/04/3e7d3ca8abaeffcfc41d36b9d6fe3aa055cecf3b56234e051991de848b2d/e2b-2.46.4.tar.gz", hash = "sha256:777d35beb00194b401a6c4ac2498aa836628839649f17aae86e85920382c8f6c", size = 228801, upload-time = "2026-09-02T20:48:36.725Z" }
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+    { url = "https://files.pythonhosted.org/packages/a0/b5/585a30223d9ee95bc94f32f8d5358b147bf93832e37b809545a3ab7892a0/e2b-2.46.4-py3-none-any.whl", hash = "sha256:5d77e9fee8571a0d24a179f14244984127d18bd93a99a5e90226c876087035b5", size = 403067, upload-time = "2026-09-02T20:48:35.082Z" },
 ]
 
 [[package]]
@@ -922,15 +910,15 @@ wheels = [
 
 [[package]]
 name = "h2"
-version = "4.3.0"
+version = "4.4.1"
 source = { registry = "https://pypi.org/simple" }
 dependencies = [
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 [[package]]
@@ -967,11 +955,11 @@ wheels = [
 
 [[package]]
 name = "hpack"
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+version = "4.2.0"
 source = { registry = "https://pypi.org/simple" }
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+    { url = "https://files.pythonhosted.org/packages/71/b4/4a9fcfb2aef6ba44d9073ecd301443aa00b3dac95de5619f2a7de7ec8a91/hpack-4.2.0-py3-none-any.whl", hash = "sha256:858ac0b02280fa582b5080d68db0899c62a80375e0e5413a74970c5e518b6986", size = 34246, upload-time = "2026-06-23T18:34:45.472Z" },
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@@ -1710,22 +1698,6 @@ wheels = [
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